Motile Tracker

An application for interactive tracking with motile. Motile is a library that makes it easy to solve tracking problems using optimization by framing the task as an Integer Linear Program (ILP). See the motile documentation for more details on the concepts and method.

• Getting started with Motile Tracker
  • Installation
    • Recommended extras
    • Gurobi license version mismatch
  • Tutorial video
  • Input data
  • Tracker widgets
  • Running tracking
  • Viewing and editing run results
• Tracking with motile
  • Motile Parameters
    • Hyperparameters
    • Constant Costs
    • Attribute weights
  • Run Viewer
• Lineage Tree View
  • Usage Overview
• Editing Tracks
  • Usage Overview
  • Editing nodes
    • Deleting nodes
    • Adding nodes
    • Updating nodes
  • Editing edges
    • Deleting edges
    • Adding an edge
    • Swapping nodes
  • Undoing and redoing actions
• Viewing Externally Generated Tracks
  • Usage Overview
• Key bindings and Mouse Functions
  • Napari viewer and layer key bindings and mouse functions
  • Tree view key and mouse functions
  • Key bindings for editing the tracks
• API Reference
  • motile_tracker
    • Submodules
    • Classes
    • Package Contents