motile_plugin.data_views.views.layers.track_points

Classes

Extended points layer that holds the track information and emits and

Module Contents

class motile_plugin.data_views.views.layers.track_points.TrackPoints(name: str, tracks_viewer: motile_plugin.data_views.views_coordinator.tracks_viewer.TracksViewer)

Bases: napari.layers.Points

Extended points layer that holds the track information and emits and responds to dynamics visualization signals

property _type_string: str

tracks_viewer

nodes

node_index_dict

_refresh(): Refresh the data in the points layer

_create_node_attrs(new_point: numpy.array) → tuple[numpy.array, dict]: Create attributes for a new node at given time point

_update_data(event): Calls the tracks controller with to update the data in the Tracks object and dispatch the update

_update_selection(): Replaces the list of selected_nodes with the selection provided by the user

get_symbols(tracks: motile_plugin.data_model.Tracks, symbolmap: dict[motile_plugin.data_model.NodeType, str]) → list[str]

update_point_outline(visible: list[int] | str) → None

Update the outline color of the selected points and visibility according to display mode

Args:: visible (list[int] | str): A list of track ids, or “all”